STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1876Putative multicopper oxidase; C-terminus is similar to an internal regions of Neisseria gonorrhoeae major anaerobically induced outer membrane protein Pan 1 AniA SW:ANIA_NEIGO (Q02219) (392 aa) fasta scores: E(): 3.5e-18, 30.1% id in 299 aa, and Neisseria meningitidis nitrite reductase, major outer membrane copper-containing protein NMA1887 TR:Q9JTB8 (EMBL:AL162757) (386 aa) fasta scores: E(): 3e-18, 30.43% id in 299 aa. (462 aa)    
Predicted Functional Partners:
DIP1877
Putative membrane protein; No significant database matches to the full length CDS. C-terminus is similar to the N-terminal regions of Rhizobium meliloti hypothetical protein SMA0447 TR:AAK64892 (EMBL:AE007216) (373 aa) fasta scores: E(): 0.48, 22.94% id in 353 aa.
     0.994
DIP1878
Putative membrane protein; Poor database matches. C-terminal region is weakly similar to Sulfolobus solfataricus hypothetical protein Sso2014 sso2014 TR:Q97WV0 (EMBL:AE006808) (307 aa) fasta scores: E(): 0.44, 21.34% id in 328 aa.
     0.986
DIP1875
Hypothetical protein; Poor database matches. C-terminal region is similar to Clostridium acetobutylicum hypothetical protein CAC0072 TR:AAK78058 (EMBL:AE007520) (77 aa) fasta scores: E(): 0.01, 29.16% id in 72 aa.
 
     0.952
DIP2249
Similar to Pseudomonas aeruginosa nitric-oxide reductase subunit B NorB or PA0524 SW:NORB_PSEAE (Q59647) (466 aa) fasta scores: E(): 4e-19, 28.54% id in 494 aa, and to Pseudomonas stutzeri nitric-oxide reductase subunit B NorB SW:NORB_PSEST (P98008) (473 aa) fasta scores: E(): 3.3e-17, 27.18% id in 493 aa.
 
  
 0.924
narI
Similar to Streptomyces coelicolor putative nitrate reductase gamma chain NarI TR:O86714 (EMBL:AL031515) (240 aa) fasta scores: E(): 1e-44, 49.78% id in 237 aa, and to Bacillus subtilis nitrate reductase gamma chain NarI SW:NARI_BACSU (P42177) (223 aa) fasta scores: E(): 6.2e-33, 42.27% id in 220 aa.
 
  
 0.920
narH
Similar to Bacillus subtilis nitrate reductase beta chain NarH SW:NARH_BACSU (P42176) (487 aa) fasta scores: E(): 1.4e-114, 56.31% id in 499 aa.
    
 0.907
narG
Similar to Escherichia coli respiratory nitrate reductase 1 alpha chain NarG or NarC or BisD or B1224 SW:NARG_ECOLI (P09152) (1246 aa) fasta scores: E(): 0, 46.16% id in 1237 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.907
narK
Putative nitrate/nitrite transport system integral membrane protein; Similar to Thermus thermophilus NarK1 TR:Q9RA46 (EMBL:AJ237974) (435 aa) fasta scores: E(): 2e-64, 59.56% id in 418 aa, and to Escherichia coli nitrite extrusion protein 1 NarK or B1223 SW:NARK_ECOLI (P10903) (463 aa) fasta scores: E(): 5.2e-17, 27.63% id in 427 aa.
    
 0.904
DIP0501
Putative nitrate/nitrite transport system integral membrane protein; Similar to Thermus thermophilus Nark2 TR:Q9RA45 (EMBL:AJ237974) (443 aa) fasta scores: E(): 2e-79, 50.22% id in 448 aa, and to Escherichia coli nitrite extrusion protein 2 NarU or B1469 SW:NARU_ECOLI (P37758) (462 aa) fasta scores: E(): 1.2e-31, 33.47% id in 472 aa.
     
 0.903
DIP1879
Putative DNA-biding protein; Similar to Mycobacterium tuberculosis hypothetical protein Rv2621c TR:O06191 (EMBL:Z95387) (224 aa) fasta scores: E(): 2.3e-05, 27.12% id in 188 aa, and to Deinococcus radiodurans conserved hypothetical protein DR0999 TR:Q9RvM8 (EMBL:AE001952) (225 aa) fasta scores: E(): 0.01, 23.62% id in 182 aa.
 
     0.885
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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