Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DIP1915Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. (225 aa)    
Predicted Functional Partners:
DIP1913
Similar to Mycobacterium tuberculosis hypothetical protein Rv3218 TR:O05848 (EMBL:Z95120) (321 aa) fasta scores: E(): 1.1e-27, 33.43% id in 329 aa, and to Streptomyces coelicolor hypothetical protein 2SC7G11.03c TR:Q9F3M0 (EMBL:AL391763) (322 aa) fasta scores: E(): 2.2e-22, 37.69% id in 329 aa.
     
 0.896
rsmA
Putative dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.765
DIP0639
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 45.7 kDa protein Rv3311 or MTV016.10 TR:O53362 (EMBL:AL021841) (420 aa) fasta scores: E(): 1.4e-25, 34.05% id in 417 aa.
  
     0.727
DIP0716
Putative secreted protein; Low similarity to Mycobacterium leprae putative membrane protein ML0810 TR:Q9CCH4 (EMBL:AL583919) (407 aa) fasta scores: E(): 1.1e-21, 26.81% id in 414 aa.
  
     0.705
DIP1144
Putative secreted protein; Similar to Rhizobium spTAL1145 MidA SWALL:Q9EYT2 (EMBL:AF312768) (281 aa) fasta scores: E(): 4.6e-18, 30.36% id in 247 aa, and to Escherichia coli glutamine-binding periplasmic protein precursor GlnH or B0811 or Z1033 or ECS0889 SWALL:GLNH_ECOLI (SWALL:P10344) (248 aa) fasta scores: E(): 1.1e-13, 30.55% id in 252 aa.
      
 0.697
DIP0567
Similar to Mycobacterium leprae hypothetical protein ML0370 TR:Q9CCV6 (EMBL:AL583918) (289 aa) fasta scores: E(): 6.4e-34, 42.46% id in 252 aa.
 
     0.686
DIP1842
Putative membrane protein; Poor database matches. Similar to Mycobacterium tuberculosis hypothetical protein Rv2520c TR:O53225 (EMBL:AL021185) (75 aa) fasta scores: E(): 2.7e-06, 45.33% id in 75 aa.
  
     0.664
DIP0834
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 11.8 kDa protein Rv0948c or MT0975 or MTCY10D7.26 SW:Y948_MYCTU (P71562) (105 aa) fasta scores: E(): 1.6e-14, 62.35% id in 85 aa.
  
     0.662
DIP2067
Conserved hypothetical protein; Similar to Mycobacterium leprae hypothetical 25.3 kDa protein ML0281 or MLCB4.24 SWALL:O69596 (EMBL:AL023514) (229 aa) fasta scores: E(): 6.1e-08, 36.63% id in 202 aa.
 
   
 0.637
DIP0246
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 17.9 kDa protein Rv3753c or MTV025.10c TR:O69720 (EMBL:AL022121) (166 aa) fasta scores: E(): 1e-20, 45.57% id in 147 aa; Conserved hypothetical protein.
  
     0.621
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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