STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1918Similar to Mycobacterium tuberculosis hypothetical protein Rv0810c TR:O53824 (EMBL:AL022004) (60 aa) fasta scores: E(): 9.9e-07, 49.23% id in 65 aa, and to Streptomyces coelicolor hypothetical protein SCD25.24c TR:Q9RKJ8 (EMBL:AL118514) (84 aa) fasta scores: E(): 2.1e-07, 52.23% id in 67 aa. (68 aa)    
Predicted Functional Partners:
DIP1917
Similar to Corynebacterium ammoniagenes hypothetical protein Orf4 TR:Q9RHX9 (EMBL:AB003158) (359 aa) fasta scores: E(): 7.6e-61, 49.17% id in 362 aa, and to Mycobacterium tuberculosis hypothetical protein Rv0811c TR:O53825 (EMBL:AL022004) (368 aa) fasta scores: E(): 7.9e-11, 42.29% id in 357 aa; Belongs to the GcvT family.
       0.626
DIP1916
Similar to Mycobacterium tuberculosis putative aminotransferase Rv0812 TR:O53826 (EMBL:AL022004) (289 aa) fasta scores: E(): 9.8e-38, 40.07% id in 277 aa, and to Streptomyces coelicolor putative aminotransferase SCL11.02c TR:Q9L1D6 (EMBL:AL157953) (273 aa) fasta scores: E(): 5e-07, 29.71% id in 249 aa.
       0.555
DIP0410
Similar to Streptomyces coelicolor putative phosphoglycerate mutase SCD65.13 TR:Q9F2R9 (EMBL:AL392176) (233 aa) fasta scores: E(): 1.5e-35, 50.25% id in 199 aa and low similarity to Escherichia coli probable phosphoglycerate mutase 2 GpmB or B4395 or Z5997 or ECS5353 SW:PMG2_ECOLI (P36942) (215 aa) fasta scores: E(): 8.5e-06, 25.96% id in 181 aa.
  
     0.479
DIP1456
Putative DNA-binding protein; Similar to Mycobacterium tuberculosis CDC1551 DNA-binding protein, putative MT2816 TR:AAK47136 (EMBL:AE007109) (112 aa) fasta scores: E(): 1.2e-09, 56.16% id in 73 aa, and to Streptomyces coelicolor hypothetical 13.6 kDa protein SC7C7.10 TR:O86815 (EMBL:AL031031) (126 aa) fasta scores: E(): 1.1e-08, 49.39% id in 83 aa.
  
     0.423
DIP1591
Putative membrane protein; Similar to Streptomyces coelicolor hypothetical 10.7 kDa protein SC4A10.11c TR:Q9S2X3 (EMBL:AL109663) (94 aa) fasta scores: E(): 2.6e-09, 34.78% id in 92 aa, and to Mycobacterium leprae possible membrane protein ML0921 TR:Q9CCE0 (EMBL:AL583920) (96 aa) fasta scores: E(): 6.7e-09, 41.57% id in 89 aa.
  
     0.403
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.