STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1949Putative acetyltransferase; Identical to Escherichia coli hypothetical protein YbbA TR:P75025 (EMBL:U12441) (166 aa) fasta scores: E(): 1.6e-70, 100% id in 166 aa, and to Acinetobacter baumannii hypothetical protein TR:AAK72477 (EMBL:AY038837) (142 aa) fasta scores: E(): 4.2e-59, 100% id in 142 aa. (166 aa)    
Predicted Functional Partners:
DIP1948
Putative dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
 
     0.853
tnpA3
Transposase; Almost identical to Salmonella enterica subsp enterica serovar Typhimurium transposase TnpA TR:Q9FDH9 (EMBL:AF261825) (264 aa) fasta scores: E(): 6.6e-112, 99.62% id in 264 aa, and Mycobacterium fortuitum transposase Tnp TR:Q49185 (EMBL:X53635) (254 aa) fasta scores: E(): 6.4e-107, 99.6% id in 254 aa, Note: This CDS is duplicated upstream in CDIP1944 (264 aa) fasta scores: E(): 2.7e-119, 100.000% identity in 264 aa overlap.
 
     0.847
tnpA2
Transposase; Almost identical to Salmonella enterica subsp enterica serovar Typhimurium transposase TnpA TR:Q9FDH9 (EMBL:AF261825) (264 aa) fasta scores: E(): 7e-112, 99.62% id in 264 aa, and to Mycobacterium fortuitum transposase Tnp TR:Q49185 (EMBL:X53635) (254 aa) fasta scores: E(): 6.7e-107, 99.6% id in 254 aa. Note: This CDS is duplicated downstream in CDIP1951 (264 aa) fasta scores: E(): 2.7e-119, 100.000% identity in 264 aa overlap.
  
     0.746
DIP1947
Integrase; N-terminus is identical to the N-terminal regions of Mycobacterium fortuitum integrase Orf2M TR:Q49186 (EMBL:X53635) (303 aa) fasta scores: E(): 3.6e-79, 100% id in 194 aa, and Acinetobacter baumannii integraseTtnp1 TR:AAA56784 (EMBL:U17586) (337 aa) fasta scores: E(): 4e-79, 100% id in 194 aa.
 
     0.735
DIP1950
Conserved hypothetical protein; Poor database matches. Identical to Salmonella enterica subsp enterica serovar Typhimurium hypothetical protein TR:Q9FDI0 (EMBL:AF261825) (95 aa) fasta scores: E(): 3.9e-37, 100% id in 95 aa.
       0.697
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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