STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1957Hypothetical protein; No significant database matches. (85 aa)    
Predicted Functional Partners:
DIP1958
Putative DNA-binding protein; No significant database matches.
       0.528
DIP1956
Hypothetical protein; C-terminal regions is similar to Streptococcus agalactiae hypothetical protein TR:Q53639 (EMBL:M22449) (141 aa) fasta scores: E(): 1.3e-06, 32.43% id in 111 aa, and to Marinococcus halophilus putative transposase TR:O06062 (EMBL:U66614) (110 aa) fasta scores: E(): 0.051, 27.18% id in 103 aa.
       0.489
DIP1959
Hypothetical protein; Poor database matches. Similar to the C-terminal region of Bacillus halodurans hypothetical protein BH3550 TR:Q9K723 (EMBL:AP001519) (146 aa) fasta scores: E(): 0.85, 32.03% id in 103 aa.
       0.422
DIP1955
Similar to Escherichia coli putative transposase for insertion sequence element IS150, InsK SW:INSK_ECOLI (P19769) (283 aa) fasta scores: E(): 3.2e-41, 43.23% id in 266 aa, and to Klebsiella pneumoniae hypothetical protein OrfB TR:Q9AG21 (EMBL:AF345899) (281 aa) fasta scores: E(): 1.3e-42, 45.45% id in 264 aa. CDS contains fewer amino acids at the N-terminus in comparison to orthologues.
       0.403
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.