STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1982Hypothetical protein; Poor database matches. Similar to the N-terminal region of Escherichia coli O157:H7 hypothetical protein ECS1344 TR:BAB34767 (EMBL:AE005309) (402 aa) fasta scores: E(): 9.6, 38.33% id in 60 aa. Doubtful CDS. (56 aa)    
Predicted Functional Partners:
clpC
ATP-dependent Clp protease ATP-binding subunit; Similar to Bacillus subtilis negative regulator of genetic competence ClpC SW:CLPC_BACSU (P37571) (810 aa) fasta scores: E(): 2.6e-134, 58.11% id in 826 aa, and to Mycobacterium tuberculosis probable ATP-dependent Clp protease ATP-binding subunit Rv3596c SW:CLPC_MYCTU (O06286) (848 aa) fasta scores: E(): 1.7e-186, 81.81% id in 847 aa; Belongs to the ClpA/ClpB family.
       0.782
DIP1981
Putative membrane protein; N-terminus is similar to the C-terminal region of Rhodobacter capsulatus hypothetical 31.0 kDa protein TR:O68029 (EMBL:AF010496) (289 aa) fasta scores: E(): 5.3e-10, 28.39% id in 243 aa, and to the full length Escherichia coli hypothetical protein YjjP SW:YJJP_ECOLI (P39402) (256 aa) fasta scores: E(): 1.3e-08, 27.16% id in 254 aa.
       0.665
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.