STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2017Putative secreted protein; Similar to Mycobacterium leprae hypothetical protein ML2321 SWALL:Q9CB79 (EMBL:AL583925) (336 aa) fasta scores: E(): 5.7e-12, 29.15% id in 343 aa. (423 aa)    
Predicted Functional Partners:
DIP2018
Hypothetical protein; Doubtful CDS. No significant database matches.
       0.553
DIP2016
Similar to Pseudomonas aeruginosa hypothetical protein PA0141 SWALL:Q9I6Z1 (EMBL:AE004452) (298 aa) fasta scores: E(): 1.2e-69, 62.06% id in 261 aa, and to Rhizobium loti MLL5641 protein SWALL:Q98BC2 (EMBL:AP003007) (302 aa) fasta scores: E(): 9.2e-57, 49.63% id in 274 aa.
       0.539
DIP0218
Putative phage protein; C-terminal region similar to C-terminal region of Mycobacteriophage TM4 GP29 TR:Q9ZX49 (EMBL:AF068845) (547 aa) fasta scores: E(): 3.7e-35, 49.14% id in 234 aa.
 
     0.524
DIP0166
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 13.4 kDa protein Rv3789 or MT3897 or MTCY13D12.23 SW:Y1I9_MYCTU (P72055) (121 aa) fasta scores: E(): 4.2e-17, 48.78% id in 123 aa.
  
     0.480
DIP1401
Putative membrane protein; Similar to Mycobacterium tuberculosis hypothetical 17.6 kDa protein Rv2698 or MTCY05A6.19 TR:O07200 (EMBL:Z96072) (161 aa) fasta scores: E(): 1.9e-21, 45.28% id in 159 aa, and to Mycobacterium leprae U1764I ML12027 TR:Q49991 (EMBL:U15181) (157 aa) fasta scores: E(): 3e-19, 41.77% id in 158 aa.
  
     0.449
DIP2019
Similar to Rhizobium loti transposase MLR9644 SWALL:Q98P21 (EMBL:AP003017) (103 aa) fasta scores: E(): 7, 30.58% id in 85 aa.
       0.401
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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