STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2023Conserved hypothetical protein; Similar to the central domain of Arthrobacter keyseri hypothetical 45.9 kDa protein TnpX SWALL:Q9AGM1 (EMBL:AF331043) (421 aa) fasta scores: E(): 2.1e-12, 35.44% id in 237 aa. (236 aa)    
Predicted Functional Partners:
DIP0119
Conserved hypothetical protein; Similar to Deinococcus radiodurans ATP-dependent DNA helicase RecG-related protein DR2199 TR:Q9RSC6 (EMBL:AE002053) (596 aa) fasta scores: E(): 8.9e-13, 24.04% id in 445 aa.
  
     0.564
DIP2022
Hypothetical protein; No significant database matches.
       0.555
DIP2300
Putative DNA-binding protein; Regions similar to Pyrococcus abyssi hypothetical 32.8 kDa protein PAB0790 SWALL:Q9UZG6 (EMBL:AJ248286) (287 aa) fasta scores: E(): 1.4e-09, 27.45% id in 306 aa, and to Thiobacillus ferrooxidans ATP-dependent DNA helicase RecG SWALL:RECG_THIFE (SWALL:O50224) (652 aa) fasta scores: E(): 1.9e-07, 30.04% id in 223 aa.
  
     0.509
DIP2311
Conserved hypothetical protein; Similar to Deinococcus radiodurans ATP-dependent DNA helicase RecG-related protein DR2199 SWALL:Q9RSC6 (EMBL:AE002053) (596 aa) fasta scores: E(): 1.1e-09, 27.17% id in 574 aa, and to Thiobacillus ferrooxidans ATP-dependent DNA helicase RecG SWALL:RECG_THIFE (SWALL:O50224) (652 aa) fasta scores: E(): 7.7e-05, 33.08% id in 133 aa.
  
     0.505
DIP2244
Conserved hypothetical protein; Similar to Mycoplasma fermentans similar to unrecognized orf in the mycobacterium tuberculosis genome sequence TR:Q9RFP6 (EMBL:AF179376) (373 aa) fasta scores: E(): 1.3e-25, 28.99% id in 369 aa, and to Mycobacterium tuberculosis hypothetical 48.1 kDa protein Rv3179 or MT3270 or MTV014.23 TR:O53329 (EMBL:AL021646) (429 aa) fasta scores: E(): 4e-15, 25.53% id in 423 aa.
 
     0.493
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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