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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2037Putative peptidase; Similar to Streptomyces coelicolor putative peptidase SCG22.20 SWALL:Q9K425 (EMBL:AL359779) (451 aa) fasta scores: E(): 5.7e-70, 44.19% id in 448 aa, and to Mycobacterium leprae hypothetical 46.6 kDa protein ML1193 or MLCB458.08 SWALL:Q9X7E4 (EMBL:AL049478) (442 aa) fasta scores: E(): 1.1e-52, 37.41% id in 441 aa. (453 aa)    
Predicted Functional Partners:
DIP2040
Putative membrane protein; Similar to Mycobacterium leprae probable conserved membrane protein ML1504 SWALL:Q9CBX0 (EMBL:AL583922) (430 aa) fasta scores: E(): 1.8e-10, 31.8% id in 349 aa, and to Mycobacterium tuberculosis hypothetical 47.1 kDa protein Rv1159 or MT1195 or MTCI65.26 SWALL:O06557 (EMBL:Z95584) (431 aa) fasta scores: E(): 4.3e-10, 31.66% id in 360 aa.
       0.755
DIP2038
Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches.
       0.746
DIP2039
Hypothetical protein; No significant database matches.
       0.746
dapE
Similar to Corynebacterium glutamicum succinyl-diaminopimelate desuccinylase DapE SW:DAPE_CORGL (Q59284) (369 aa) fasta scores: E(): 1.2e-87, 61.11% id in 360 aa, and to Escherichia coli succinyl-diaminopimelate desuccinylase DapE or MsgB or B2472 SW:DAPE_ECOLI (P24176) (375 aa) fasta scores: E(): 3.8e-09, 28.53% id in 354 aa.
  
   
 0.440
fas
Putative fatty acid synthase; Similar to the N-terminal region of Corynebacterium ammoniagenes fatty acid synthase Fas TR:Q04846 (EMBL:X64795) (3104 aa) fasta scores: E(): 0, 61.33% id in 3018 aa, and to the full length of Mycobacterium tuberculosis fatty acid synthase Rv2524c TR:AAK46907 (EMBL:Z83863) (3069 aa) fasta scores: E(): 1e-197, 51.37% id in 3083 aa, and of Corynebacterium glutamicum 3-oxoacyl-(acyl-carrier-protein) synthase CGL2495 SWALL:Q8NMS0 (EMBL:AP005281) (2993 aa) fasta scores: E(): 0, 67.35% id in 3008 aa.
 
  
 0.426
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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