STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2050Similar to Streptomyces coelicolor putative ABC transporter ATP-binding subunit 2SC6G5.39c SWALL:Q9K4B6 (EMBL:AL359152) (346 aa) fasta scores: E(): 9.3e-56, 60% id in 305 aa, and to Bacillus sphaericus CDD4-like protein SWALL:Q9Z5R0 (EMBL:AJ224479) (311 aa) fasta scores: E(): 7.9e-29, 37.45% id in 299 aa. (309 aa)    
Predicted Functional Partners:
DIP2049
Low similarity to Streptomyces coelicolor putative ABC transporter integral membrane protein SCE8.16c SWALL:Q9Z4W1 (EMBL:AL035654) (264 aa) fasta scores: E(): 1.7e-09, 26.37% id in 254 aa.
 
     0.876
DIP2053
Putative protein kinase; Similar to Mycobacterium tuberculosis probable serine/threonine-protein kinase PknG or Rv0410c or MT0423 or MTCY22G10.06c SWALL:PKNG_MYCTU (SWALL:P96256) (750 aa) fasta scores: E(): 2.8e-52, 44.97% id in 656 aa, and to Mycobacterium tuberculosis probable serine/threonine-protein kinase PknL or Rv2176 or MT2232 or MTV021.09 SWALL:PKNL_MYCTU (SWALL:O53510) (399 aa) fasta scores: E(): 4e-06, 28.61% id in 318 aa.
  
    0.615
DIP2051
Similar to Mycobacterium leprae putative membrane protein MLCB1450.21c SWALL:Q9ZBL6 (EMBL:AL035159) (403 aa) fasta scores: E(): 3.4e-22, 32.51% id in 406 aa, and to Mycobacterium tuberculosis hypothetical 47.1 kDa protein Rv0412c or MT0425 or MTCY22G10.08c SWALL:AAK44649 (EMBL:Z84724) (439 aa) fasta scores: E(): 3.1e-21, 33.09% id in 414 aa.
       0.610
DIP2052
Putative ABC transpoter membrane protein; Similar to Mycobacterium tuberculosis CDC1551 amino acid ABC transporter, amino acid-binding protein MT0424 SWALL:AAK44648 (EMBL:AE006946) (328 aa) fasta scores: E(): 1.5e-33, 41.84% id in 325 aa, and to Bacillus stearothermophilus glutamine-binding protein precursor GlnH SWALL:GLNH_BACST (SWALL:P27676) (262 aa) fasta scores: E(): 5.3e-19, 31.25% id in 240 aa.
       0.610
DIP2143
Putative ABC transport system integral membrane protein; Weakly similar to Bacillus subtilis hypothetical YxlG TR:P94375 (EMBL:D83026) (259 aa) fasta scores: E(): 1.2, 24.72% id in 182 aa, and to Rhizobium loti Mll2378 protein TR:Q98IJ2 (EMBL:AP002999) (339 aa) fasta scores: E(): 1.3, 26.98% id in 252 aa. Lies alongside a putative ABC transporter ATP-binding subunit.
  
 
 0.589
DIP0539
Similar to Bacillus subtilis probable multiple sugar-binding transport ATP-binding protein MsmX SW:MSMX_BACSU (P94360) (365 aa) fasta scores: E(): 1.1e-54, 49.86% id in 367 aa; Belongs to the ABC transporter superfamily.
 
    
0.454
DIP0321
Similar to Streptomyces coelicolor ABC transporter ATP-binding protein SC4A2.02c TR:O86658 (EMBL:AL031182) (229 aa) fasta scores: E(): 6.7e-12, 39.3% id in 201 aa.
  
     0.409
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.