STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2061Putative membrane protein; Similar to Helicobacter pylori hypothetical 6.1 kDa protein HP0594 SWALL:O25316 (EMBL:AE000573) (54 aa) fasta scores: E(): 0.026, 32.72% id in 55 aa, and to Campylobacter jejuni small hydrophobic protein CJ0018c SWALL:Q9PJ93 (EMBL:AL139074) (55 aa) fasta scores: E(): 0.046, 35.71% id in 56 aa. Note: Highly hydrophobic. (55 aa)    
Predicted Functional Partners:
DIP2060
Putative membrane protein; Low similarity to Campylobacter jejuni putative membrane protein CjaE SWALL:Q9RM70 (EMBL:AJ249744) (505 aa) fasta scores: E(): 3.1e-24, 28.45% id in 471 aa; Belongs to the DsbB family.
       0.778
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.