STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2069Putative secreted protein; No significant database matches. (377 aa)    
Predicted Functional Partners:
DIP2068
Putative membrane protein; Similar to Corynebacterium glutamicum hypothetical protein in fda 3'region SWALL:YFDA_CORGL (SWALL:Q99340) (359 aa) fasta scores: E(): 4.8e-63, 51.61% id in 341 aa, and to Mycobacterium tuberculosis hypothetical 36.8 kDa protein Rv2571c or MT2647 or MTCY227.30 SWALL:YP71_MYCTU (SWALL:Q50650) (355 aa) fasta scores: E(): 1.1e-12, 25.07% id in 331 aa. Note: Also similar to DIP2070 (393 aa) E(): 8.6e-66; 52.174% identity in 368 aa overlap.
       0.540
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
   0.435
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.