STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DIP2072Hypothetical protein; No significant database matches. (370 aa)    
Predicted Functional Partners:
DIP2073
Hypothetical protein; No significant database matches.
 
     0.937
DIP0858
Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches.
      
 0.618
DIP2074
Putative tranposase; Similar to Escherichia coli Hp2 or InsA SWALL:O87507 (EMBL:AF081284) (100 aa) fasta scores: E(): 8.6e-07, 31.95% id in 97 aa, and to Shigella flexneri TnpJ or S0170 or S0109 SWALL:Q9XCG9 (EMBL:AF141323) (100 aa) fasta scores: E(): 8.6e-07, 31.95% id in 97 aa, and to Shigella dysenteriae InsA SWALL:Q9LA21 (EMBL:AF153317) (100 aa) fasta scores: E(): 2.1e-06, 31.95% id in 97 aa.
 
     0.459
DIP2071
Hypothetical protein; No significant database matches.
       0.410
DIP0703
Putative oxidoreductase; Similar to Mycobacterium tuberculosis hypothetical 40.8 kDa protein Rv3230c or MTCY20B11.05c TR:O05875 (EMBL:Z95121) (380 aa) fasta scores: E(): 4.8e-60, 49.14% id in 350 aa, and to Escherichia coli NADH oxidoreductase Hcr or B0872 SW:HCR_ECOLI (P75824) (322 aa) fasta scores: E(): 1.9e-13, 28.71% id in 296 aa.
  
   
 0.407
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.