STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2164Similar to Streptomyces coelicolor putative transport system integral membrane protein SC4C2.14 TR:Q9EWP8 (EMBL:AL450432) (284 aa) fasta scores: E(): 4.4e-17, 32.567% id in 261 aa, and to Rhizobium loti ABC transporter, permease protein MLL7032 TR:Q987J0 (EMBL:AP003010) (283 aa) fasta scores: E(): 1.9e-14, 30.859% id in 256 aa. (273 aa)    
Predicted Functional Partners:
DIP2163
Similar to Streptomyces coelicolor putative metal transport integral membrane protein SC4C2.13 TR:Q9EWP9 (EMBL:AL450432) (316 aa) fasta scores: E(): 3.2e-30, 39.344% id in 305 aa, and to Rhizobium meliloti ABC transporter permease SMA0300 TR:AAK64819 (EMBL:AE007209) (317 aa) fasta scores: E(): 2.1e-20, 27.303% id in 304 aa.
 
 
 0.991
DIP2162
Similar to Streptomyces coelicolor putative secreted solute-binding protein SC4C2.12 TR:Q9EWQ0 (EMBL:AL450432) (528 aa) fasta scores: E(): 4.7e-23, 29.923% id in 518 aa, and to Rhizobium loti ABC transporter, binding protein MLL5127 TR:Q98CJ3 (EMBL:AP003005) (528 aa) fasta scores: E(): 1.4e-22, 27.921% id in 505 aa. Note: Contains a putative twin-arginine translocation (TAT) system recognition motif (RRDFLK) at the N-terminal region.
 
 
 0.980
DIP2165
Similar to Rhizobium meliloti putative ABC transporter SMA0298 TR:AAK64817 (EMBL:AE007209) (604 aa) fasta scores: E(): 1.5e-15, 27.536% id in 552 aa, and to Streptomyces coelicolor putative peptide transport ATP-binding protein SC9F2.04 TR:Q9Z531 (EMBL:AL035559) (359 aa) fasta scores: E(): 3.4e-15, 39.409% id in 203 aa.
 
 
 0.961
DIP1741
Similar to Rhizobium loti permease protein of oligopeptide ABC transporter MLR1187 TR:Q98L41 (EMBL:AP002996) (315 aa) fasta scores: E(): 1.3e-43, 42.2% id in 308 aa, and to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 2e-35, 35.93% id in 320 aa.
 
 
 0.895
DIP2127
Similar to Streptomyces coelicolor putative transport permease protein SC9B5.19 TR:Q9ZBG1 (EMBL:AL035206) (334 aa) fasta scores: E(): 8.6e-44, 43.51% id in 324 aa, and to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 6.2e-25, 28.61% id in 318 aa.
 
 
 0.894
DIP0514
Similar to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 4.6e-31, 34.7% id in 317 aa.
 
 
 0.887
DIP0957
Similar to Mycobacterium tuberculosis putative peptide transport system permease Rv3665c or MTV025.013c TR:O69633 (EMBL:AL022121) (308 aa) fasta scores: E(): 4.9e-69, 63.48% id in 304 aa, and to Bacillus subtilis oligopeptide transport system permease protein OppB or Spo0KB SW:OPPB_BACSU (P24138) (311 aa) fasta scores: E(): 1.8e-37, 37.33% id in 308 aa, and to Corynebacterium glutamicum ABC-type transporter, permease components CGL1991 SWALL:Q8NP34 (EMBL:AP005280) (308 aa) fasta scores: E(): 1.5e-95, 84.09% id in 308 aa.
 
 
 0.887
DIP0324
Putative secreted protein; Similar to Streptomyces coelicolor putative solute-binding lipoprotein SC4G2.18 TR:O86690 (EMBL:AL031371) (503 aa) fasta scores: E(): 1.3e-64, 39.63% id in 497 aa.
 
 
 0.838
DIP0512
Similar to Bacillus subtilis oligopeptide transport ATP-binding protein OppF or Spo0KE SW:OPPF_BACSU (P24137) (308 aa) fasta scores: E(): 1.7e-36, 48.51% id in 235 aa.
 
   0.767
DIP1370
Conserved hypothetical protein; Similar to Corynebacterium glutamicum dipeptide-binding protein DciaE SWALL:O87329 (EMBL:AF038651) (502 aa) fasta scores: E(): 4e-83, 48.61% id in 434 aa, and to Mycobacterium tuberculosis hypothetical lipoprotein Rv2585c precursor or MT2662 or MTCY227.16 SWALL:YP85_MYCTU (SWALL:Q50636) (557 aa) fasta scores: E(): 7.1e-30, 29.09% id in 574 aa.
  
 
 0.766
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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