STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pckGPhosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (612 aa)    
Predicted Functional Partners:
pyc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.983
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
     
 0.957
DIP0892
Similar to Streptomyces coelicolor putative glyceraldehyde-3-phosphate dehydrogenase SC4G1.06c TR:Q9FC43 (EMBL:AL391039) (481 aa) fasta scores: E(): 1.8e-99, 54.44% id in 472 aa and C-terminal region similar to Bacillus subtilis glyceraldehyde 3-phosphate dehydrogenase 1 GapA or Gap SW:G3P1_BACSU (P09124) (334 aa) fasta scores: E(): 6.7e-40, 41.39% id in 343 aa.
 
 
  
 0.949
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.944
gltA
Citrate synthase; Similar to Corynebacterium glutamicum citrate synthase GltA SW:CISY_CORGL (P42457) (437 aa) fasta scores: E(): 2.5e-151, 87.52% id in 433 aa.
   
 
 0.930
pyk
Pyruvate kinase; Similar to Corynebacterium glutamicum pyruvate kinase Pyk SW:KPYK_CORGL (Q46078) (475 aa) fasta scores: E(): 1.3e-146, 83.36% id in 469 aa, and to Bacillus psychrophilus pyruvate kinase Pyk SW:KPYK_BACPY (P51182) (586 aa) fasta scores: E(): 6.9e-64, 41.45% id in 480 aa.
   
 
 0.930
mqo
Putative magnesium chelatase (pseudogene); HMMSmart hit to SM00382, ATPases associated with a variety of cellular activities.
   
 
 0.916
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.911
gap
Similar to Corynebacterium glutamicum glyceraldehyde 3-phosphate dehydrogenase Gap SWALL:G3P_CORGL (SWALL:Q01651) (336 aa) fasta scores: E(): 5.5e-99, 80% id in 330 aa, and to Streptomyces coelicolor glyceraldehyde 3-phosphate dehydrogenase Gap or SCC54.07c SWALL:G3P_STRCO (SWALL:Q9Z518) (336 aa) fasta scores: E(): 1.1e-84, 67.26% id in 336 aa; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 
  
 0.873
DIP0939
Similar to Streptomyces coelicolor conserved hypothetical protein SCK7.20c TR:Q9FBN2 (EMBL:AL391754) (343 aa) fasta scores: E(): 7.1e-79, 67.89% id in 327 aa, and to Escherichia coli protein GlpX or B3925 SW:GLPX_ECOLI (P28860) (336 aa) fasta scores: E(): 4.6e-39, 44.61% id in 325 aa.
      
 0.868
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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