STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2244Conserved hypothetical protein; Similar to Mycoplasma fermentans similar to unrecognized orf in the mycobacterium tuberculosis genome sequence TR:Q9RFP6 (EMBL:AF179376) (373 aa) fasta scores: E(): 1.3e-25, 28.99% id in 369 aa, and to Mycobacterium tuberculosis hypothetical 48.1 kDa protein Rv3179 or MT3270 or MTV014.23 TR:O53329 (EMBL:AL021646) (429 aa) fasta scores: E(): 4e-15, 25.53% id in 423 aa. (415 aa)    
Predicted Functional Partners:
DIP2242
Conserved hypothetical protein; Similar to, but shorter than, Mycobacterium tuberculosis hypothetical 47.0 kDa protein Rv3835 or MTCY01A6.34c TR:P96243 (EMBL:Z83864) (449 aa) fasta scores: E(): 6.4e-31, 34.83% id in 310 aa.
       0.563
DIP2243
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 15.0 kDa protein Rv3836 or MTCY01A6.33c TR:P96242 (EMBL:Z83864) (137 aa) fasta scores: E(): 2.5e-18, 47.78% id in 113 aa, and to Streptomyces coelicolor hypothetical 13.1 kDa protein SCD25.30 TR:Q9RKJ2 (EMBL:AL118514) (116 aa) fasta scores: E(): 5.9e-16, 46.08% id in 115 aa.
       0.563
DIP2337
Similar to Lactococcus lactis abortive phage resistance protein AbilI SWALL:O06042 (EMBL:U94520) (458 aa) fasta scores: E(): 7.4e-08, 26.39% id in 466 aa. Lies in DNA region of low GC content.
  
     0.560
DIP2241
Similar to Streptomyces coelicolor putative GntR-family transcriptional regulator SC7E4.28c TR:Q9K492 (EMBL:AL359214) (254 aa) fasta scores: E(): 7.3e-21, 34.82% id in 224 aa, and to Escherichia coli fatty acyl responsive regulator FarR or G30 or B0730 SW:FARR_ECOLI (P13669) (240 aa) fasta scores: E(): 6.4e-14, 30.93% id in 236 aa.
       0.552
DIP2311
Conserved hypothetical protein; Similar to Deinococcus radiodurans ATP-dependent DNA helicase RecG-related protein DR2199 SWALL:Q9RSC6 (EMBL:AE002053) (596 aa) fasta scores: E(): 1.1e-09, 27.17% id in 574 aa, and to Thiobacillus ferrooxidans ATP-dependent DNA helicase RecG SWALL:RECG_THIFE (SWALL:O50224) (652 aa) fasta scores: E(): 7.7e-05, 33.08% id in 133 aa.
  
     0.528
DIP0119
Conserved hypothetical protein; Similar to Deinococcus radiodurans ATP-dependent DNA helicase RecG-related protein DR2199 TR:Q9RSC6 (EMBL:AE002053) (596 aa) fasta scores: E(): 8.9e-13, 24.04% id in 445 aa.
  
     0.498
DIP2023
Conserved hypothetical protein; Similar to the central domain of Arthrobacter keyseri hypothetical 45.9 kDa protein TnpX SWALL:Q9AGM1 (EMBL:AF331043) (421 aa) fasta scores: E(): 2.1e-12, 35.44% id in 237 aa.
 
     0.494
DIP0348
Similar to Neisseria meningitidis hypothetical protein NMB0459 TR:Q9K0V1 (EMBL:AE002402) (369 aa) fasta scores: E(): 1.8e-58, 45.47% id in 365 aa.
 
     0.492
DIP2317
Similar to Arthrobacter keyseri hypothetical 45.9 kDa protein TnpX SWALL:Q9AGM1 (EMBL:AF331043) (421 aa) fasta scores: E(): 9.4e-26, 33.86% id in 378 aa, and to Agrobacterium tumefaciens STRC58 AGR_PAT_51p SWALL:AAK90413 (EMBL:AE007876) (393 aa) fasta scores: E(): 1.9e-19, 29.67% id in 374 aa.
 
     0.472
DIP0047
Similar to Mycobacterium smegmatis putative transposase TR:O70063 (EMBL:AF036759) (503 aa) fasta scores: E(): 4.7e-88, 50% id in 498 aa. Presents a frameshift at residue 65.
  
     0.433
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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