STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2252Putative conserved integral membrane protein; Similar to Bacillus subtilis hypothetical 72.2 kDa protein YrhL TR:O05402 (EMBL:U93874) (634 aa) fasta scores: E(): 5.9e-41, 31.37% id in 631 aa, and to Streptomyces coelicolor possible integral membrane protein SC8G12.07c TR:Q9KYZ8 (EMBL:AL355753) (418 aa) fasta scores: E(): 2.5e-32, 37.7% id in 419 aa. (597 aa)    
Predicted Functional Partners:
DIP2251
Similar to Vibrio cholerae sodium/alanine symporter Vc0784 TR:Q9KTV3 (EMBL:AE004164) (516 aa) fasta scores: E(): 1.7e-83, 47.34% id in 509 aa, and to Bacillus PS3 sodium/proton-dependent alanine carrier protein Acp SW:ALCP_BACP3 (P30145) (445 aa) fasta scores: E(): 3.9e-58, 46.25% id in 454 aa.
  
    0.501
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.