STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2287Putative integral membrane transport protein; Similar to Deinococcus radiodurans sugar transporter, putative DRA0271 SWALL:Q9RYN9 (EMBL:AE001863) (454 aa) fasta scores: E(): 9.2e-54, 41.12% id in 445 aa, and to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 1.8e-25, 30.4% id in 398 aa. (441 aa)    
Predicted Functional Partners:
DIP2286
Similar to Streptomyces coelicolor probable cation-transporting P-type ATPase SCC57A.02 SWALL:Q9RDJ4 (EMBL:AL136519) (760 aa) fasta scores: E(): 7e-146, 60.21% id in 744 aa, and to Rhizobium meliloti copper-transporting ATPase ActP SWALL:ATCU_RHIME (SWALL:Q9X5X3) (827 aa) fasta scores: E(): 1.3e-84, 42.12% id in 762 aa.
       0.687
DIP2285
Putative cation transport protein; Similar to Streptomyces coelicolor putative metal associated protein SCG20A.25 SWALL:Q9K3L5 (EMBL:AL360055) (77 aa) fasta scores: E(): 1.3e-05, 45.9% id in 61 aa, and to Helicobacter felis cop associated protein CopP SWALL:COPP_HELFE (SWALL:O32620) (66 aa) fasta scores: E(): 0.0074, 36.92% id in 65 aa.
       0.565
DIP2284
Putative thioredoxin; Similar to Streptomyces coelicolor thioredoxin TrxA2 SWALL:Q9RD25 (EMBL:AL133422) (134 aa) fasta scores: E(): 1.7e-23, 52.89% id in 121 aa, and to Escherichia coli thioredoxin 2 TrxC or B2582 or Z3867 or ECS3448 SWALL:THI2_ECOLI (SWALL:P33636) (139 aa) fasta scores: E(): 5.9e-11, 38% id in 100 aa; Belongs to the thioredoxin family.
       0.504
DIP2328
Conserved integral membrane protein; Similar to Clostridium acetobutylicum uncharacterized conserved membrane protein, similar to Mdr CAC0829 SWALL:AAK78805 (EMBL:AE007599) (308 aa) fasta scores: E(): 0.0003, 25.88% id in 170 aa, and has region in common with Enterococcus faecium protein VanZ SWALL:VANZ_ENTFC (SWALL:Q06242) (161 aa) fasta scores: E(): 0.19, 29.16% id in 96 aa.
 
     0.468
DIP2282
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis 35 kDa protein Rv2744c or MT2815 or MTV002.09c SWALL:35KD_MYCTU (SWALL:P31511) (270 aa) fasta scores: E(): 8.4e-29, 45.52% id in 257 aa.
       0.466
DIP0284
Similar to Escherichia coli O157:H7 putative periplasmic-iron-binding protein ECS0415 TR:BAB33838 (EMBL:AP002551) (343 aa) fasta scores: E(): 5.5e-19, 27.139% id in 339 aa, and to Actinobacillus pleuropneumoniae AfuA protein TR:Q57512 (EMBL:U05042) (346 aa) fasta scores: E(): 4.2e-16, 26.280% id in 293 aa, and to Serratia marcescens iron(III)-binding periplasmic protein precursor SfuA SW:SFUA_SERMA (P21408) (338 aa) fasta scores: E(): 0.00026, 20.000% id in 290 aa.
  
    0.405
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.