STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2301Conserved hypothetical protein; Similar to Staphylococcus aureus (strain N315) conserved hypothetical protein SA2481 or SAV2689 SWALL:Q99QV2 (EMBL:AP003138) (318 aa) fasta scores: E(): 3.6e-25, 34.68% id in 297 aa; Belongs to the UPF0176 family. (312 aa)    
Predicted Functional Partners:
DIP2302
Similar to Streptomyces coelicolor putative integral membrane protein SC4A9.02c SWALL:Q9L1W0 (EMBL:AL138668) (231 aa) fasta scores: E(): 8.7e-31, 41.5% id in 200 aa.
       0.522
DIP2300
Putative DNA-binding protein; Regions similar to Pyrococcus abyssi hypothetical 32.8 kDa protein PAB0790 SWALL:Q9UZG6 (EMBL:AJ248286) (287 aa) fasta scores: E(): 1.4e-09, 27.45% id in 306 aa, and to Thiobacillus ferrooxidans ATP-dependent DNA helicase RecG SWALL:RECG_THIFE (SWALL:O50224) (652 aa) fasta scores: E(): 1.9e-07, 30.04% id in 223 aa.
       0.471
DIP1275
Putative DNA-binding protein; No significant database matches.
  
     0.460
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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