STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2307Putative integral membrane protein; No significant database matches. (208 aa)    
Predicted Functional Partners:
DIP2306
Putative hydrolase; Similar to Saccharopolyspora erythraea putative lysozyme SWALL:O33985 (EMBL:U82823) (241 aa) fasta scores: E(): 1.3e-23, 36.9% id in 233 aa, and to Clostridium acetobutylicum autolytic lysozyme Lyc or CAC0554 SWALL:LYC_CLOAB (SWALL:P34020) (324 aa) fasta scores: E(): 4.7e-10, 28.27% id in 191 aa.
       0.596
sepF
Conserved hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
     0.525
DIP2308
Similar to proteins associated with plasmid replication-partitioning eg. Plesiomonas shigelloides hypothetical SoJ-like protein Soj SWALL:Q9RLE7 (EMBL:AJ249644) (182 aa) fasta scores: E(): 1.8e-05, 29.31% id in 191 aa, and to Pseudomonas fluorescens ParA protein SWALL:Q9RLI2 (EMBL:AJ250853) (394 aa) fasta scores: E(): 3.4e-05, 28.77% id in 212 aa, and to Thermus thermophilus putative partitioning protein putative ParA/Soj SWALL:Q9LCY1 (EMBL:AJ277593) (248 aa) fasta scores: E(): 0.00017, 31.63% id in 196 aa, and to Lactobacillus reuteri replication-associated protein A RepA SWALL:O52364 [...]
       0.460
DIP1150
Similar to Bacillus subtilis transcription antiterminator LicT or N15A SWALL:LICT_BACSU (SWALL:P39805) (277 aa) fasta scores: E(): 2.6e-20, 28.72% id in 275 aa, and to Escherichia coli cryptic beta-glucoside Bgl operon antiterminator BglG or BglC or B3723 SWALL:BGLG_ECOLI (SWALL:P11989) (278 aa) fasta scores: E(): 1.4e-18, 27.33% id in 278 aa.
  
     0.425
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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