STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2308Similar to proteins associated with plasmid replication-partitioning eg. Plesiomonas shigelloides hypothetical SoJ-like protein Soj SWALL:Q9RLE7 (EMBL:AJ249644) (182 aa) fasta scores: E(): 1.8e-05, 29.31% id in 191 aa, and to Pseudomonas fluorescens ParA protein SWALL:Q9RLI2 (EMBL:AJ250853) (394 aa) fasta scores: E(): 3.4e-05, 28.77% id in 212 aa, and to Thermus thermophilus putative partitioning protein putative ParA/Soj SWALL:Q9LCY1 (EMBL:AJ277593) (248 aa) fasta scores: E(): 0.00017, 31.63% id in 196 aa, and to Lactobacillus reuteri replication-associated protein A RepA SWALL:O52364 [...] (353 aa)    
Predicted Functional Partners:
parB
Similar to Mycobacterium tuberculosis probable chromosome partitioning protein ParB or Rv3917c or MT4036 or MTV028.08c SW:PARB_MYCTU (O53595) (344 aa) fasta scores: E(): 7.4e-47, 54.93% id in 375 aa, and to Streptomyces coelicolor putative chromosome partitioning protein ParB TR:Q9RFM2 (EMBL:AF187159) (368 aa) fasta scores: E(): 3.2e-43, 47.69% id in 369 aa; Belongs to the ParB family.
 
 
 0.922
DIP1188
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
  
 0.577
DIP2307
Putative integral membrane protein; No significant database matches.
       0.460
ftsZ
Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.427
DIP2309
Putative DNA-binding protein; No significant database matches.
       0.410
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.