STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP2362Putative iron-sulphur protein; Similar to Mycobacterium smegmatis Rieske iron-sulfur protein QcrA TR:Q9XBV4 (EMBL:AF155062) (138 aa) fasta scores: E(): 1.7e-11, 40.9% id in 132 aa, and to Streptomyces coelicolor putative iron-sulphur protein SCI51.03 TR:Q9S237 (EMBL:AL109848) (131 aa) fasta scores: E(): 3.8e-10, 35.15% id in 128 aa. (136 aa)    
Predicted Functional Partners:
trpB2
Tryptophan synthase beta chain TrpB2; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.842
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
       0.842
DIP0402
Similar to Mycobacterium leprae possible uroporphyrin-III C-methyltransferase HemD or ML2420 TR:Q9CB60 (EMBL:AL583925) (563 aa) fasta scores: E(): 9.3e-91, 52.81% id in 551 aa.
 
  
 0.827
DIP2363
Similar to Streptomyces coelicolor putative transmembrane protein SC4B5.06 TR:Q9ZBW2 (EMBL:AL034443) (345 aa) fasta scores: E(): 1.3e-52, 52.73% id in 311 aa.
       0.802
DIP2364
Hypothetical protein; No significant database matches.
       0.802
DIP1748
Putative oxidase; Similar to Lactococcus lactis NADH oxidase NoxC TR:Q9CHE6 (EMBL:AE006312) (547 aa) fasta scores: E(): 5.8e-81, 44.95% id in 545 aa, and to Enterococcus faecalis NADH oxidase Nox SW:NAOX_ENTFA (P37061) (446 aa) fasta scores: E(): 3.8e-30, 27.46% id in 437 aa.
  
 
 0.791
narH
Similar to Bacillus subtilis nitrate reductase beta chain NarH SW:NARH_BACSU (P42176) (487 aa) fasta scores: E(): 1.4e-114, 56.31% id in 499 aa.
  
  
 0.695
DIP0498
Similar to Streptomyces coelicolor nitrate reductase delta chain NarJ3 TR:Q9EWF5 (EMBL:AL451182) (220 aa) fasta scores: E(): 3e-20, 39.39% id in 198 aa, and to Bacillus subtilis nitrate reductase delta chain NarJ SW:NARJ_BACSU (P42178) (184 aa) fasta scores: E(): 1.9e-12, 29.14% id in 175 aa.
 
  
 0.596
narI
Similar to Streptomyces coelicolor putative nitrate reductase gamma chain NarI TR:O86714 (EMBL:AL031515) (240 aa) fasta scores: E(): 1e-44, 49.78% id in 237 aa, and to Bacillus subtilis nitrate reductase gamma chain NarI SW:NARI_BACSU (P42177) (223 aa) fasta scores: E(): 6.2e-33, 42.27% id in 220 aa.
 
  
 0.526
narG
Similar to Escherichia coli respiratory nitrate reductase 1 alpha chain NarG or NarC or BisD or B1224 SW:NARG_ECOLI (P09152) (1246 aa) fasta scores: E(): 0, 46.16% id in 1237 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.512
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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