STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysASulfate transport system permease protein (Pseudogene); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (354 aa)    
Predicted Functional Partners:
sbp
Similar to Escherichia coli sulfate-binding protein precursor Sbp or B3917 SW:SUBI_ECOLI (P06997) (329 aa) fasta scores: E(): 3.5e-85, 67.732% id in 313 aa, and to Enterobacter cloacae putative sulfur-binding protein SbP TR:Q9Z6C2 (EMBL:AF098509) (329 aa) fasta scores: E(): 5.5e-87, 68.889% id in 315 aa.
 
 
 0.999
cysD
Phosphoadenosine phosphosulfate reductase (Pseudogene); (C)1 in pertussis; (C)2 in parapertussis and bronchiseptica.
 
 
 0.995
cysI
Similar to Pseudomonas aeruginosa sulfite reductase CysI TR:O31037 (EMBL:AF026066) (552 aa) fasta scores: E(): 1.5e-133, 64.31% id in 566 aa.
  
  
 0.958
BP1209
Probable oxidoreductase; Similar to Escherichia coli sulfite reductase [NADPH] flavoprotein alpha-component CysJ or B2764 SW:CYSJ_ECOLI (P38038) (598 aa) fasta scores: E(): 7.2e-14, 27.01% id in 596 aa, and to Caulobacter crescentus sulfite reductase Cc3063 TR:Q9A3Y7 (EMBL:AE005969) (504 aa) fasta scores: E(): 1.3e-40, 51.88% id in 503 aa.
 
  
 0.934
modC
Molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.863
cysM
Cysteine synthase B; Similar to Escherichia coli cysteine synthase B CysM or B2421 SW:CYSM_ECOLI (P16703) (303 aa) fasta scores: E(): 7.7e-67, 64.407% id in 295 aa, and to Pseudomonas aeruginosa cysteine synthase B CysM or Pa0932 TR:Q9I526 (EMBL:AE004527) (299 aa) fasta scores: E(): 2.2e-72, 67.442% id in 301 aa; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.727
BP2071
Putative molybdenum-binding protein; Similar to Azotobacter vinelandii molybdenum transport protein ModA SW:MODA_AZOVI (P37733) (270 aa) fasta scores: E(): 3e-33, 46.341% id in 246 aa and Rhodobacter capsulatus molybdenum-pterin binding protein MopA SW:MOPA_RHOCA (Q08385) (265 aa) fasta scores: E(): 7.6e-27, 42.308% id in 260 aa.
  
  
 0.624
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.612
BP1929
Similar to Rhizobium loti ABC transporter, permease protein Mll2949 TR:Q98HB0 (EMBL:AP003000) (265 aa) fasta scores: E(): 3.9e-31, 40.4% id in 250 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter Pa0606 TR:Q9I5T2 (EMBL:AE004497) (276 aa) fasta scores: E(): 3.3e-30, 38.4% id in 263 aa.
     0.573
BP2398
Putative L-asparaginase; Similar to Vibrio cholerae asparaginase, putative vc2603 TR:Q9KNX7 (EMBL:AE004327) (326 aa) fasta scores: E(): 4.2e-47, 48.75% id in 320 aa, and to Lupinus luteus L-asparaginase SW:ASPG_LUPLU (Q9ZSD6) (325 aa) fasta scores: E(): 9.7e-40, 42.99% id in 307 aa.
   
    0.572
Your Current Organism:
Bordetella pertussis
NCBI taxonomy Id: 257313
Other names: B. pertussis Tohama I, Bordetella pertussis Tohama I
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