STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP2889Putative c'cytochrome; Similar to Alcaligenes xylosoxydans xylosoxydans cytochrome c' SW:CYCP_ALCXX (P00138) (127 aa) fasta scores: E(): 1.2e-39, 81.89% id in 127 aa and to Neisseria meningitidis putative C-type cytochrome Nma1119 TR:Q9JUV4 (EMBL:AL162755) (152 aa) fasta scores: E(): 2.3e-15, 38.81% id in 152 aa. (152 aa)    
Predicted Functional Partners:
BP2888
Putative integral membrane protein; Similar to Chromatium vinosum hydrogenase cytochrome B-type subunit homolog TR:Q46471 (EMBL:U25811) (231 aa) fasta scores: E(): 4.2e-30, 45.07% id in 213 aa.
 
    0.786
BP3744
Putative bifunctional protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.634
purB
Similar to Escherichia coli adenylosuccinate lyase PurB or b1131 SW:PUR8_ECOLI (P25739) (456 aa) fasta scores: E(): 1.7e-108, 61.77% id in 450 aa, and to Haemophilus influenzae adenylosuccinate lyase PurB or hi0639 SW:PUR8_HAEIN (P44797) (456 aa) fasta scores: E(): 4.6e-107, 60.44% id in 450 aa.
  
    0.623
BP2172
Putative cytochrome C oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.609
argA
Similar to Pseudomonas aeruginosa amino-acid acetyltransferase ArgA or pa5204 SW:ARGA_PSEAE (P22567) (432 aa) fasta scores: E(): 2.8e-71, 45.7% id in 431 aa, and to Escherichia coli amino-acid acetyltransferase ArgA or b2818 or z4135 or ecs3675 SW:ARGA_ECOLI (P08205) (443 aa) fasta scores: E(): 9.1e-71, 42.06% id in 435 aa; Belongs to the acetyltransferase family. ArgA subfamily.
   
    0.540
BP2454
Putative oxidoreductase; Similar to Alcaligenes eutrophus D-beta-hydroxybutyrate dehydrogenase HbdH1 SW:BDHA_ALCEU (Q9X6U2) (258 aa) fasta scores: E(): 7.9e-57, 63.84% id in 260 aa and to Rhizobium meliloti D-beta-hydroxybutyrate dehydrogenase BdhA or Rb1136 or Smb21010 SW:BDHA_RHIME (O86034) (258 aa) fasta scores: E(): 1e-45, 54.29% id in 256 aa.
   
    0.422
BP2891
Conserved hypothetical protein; Similar to serveral including: Escherichia coli hypothetical Gst-like protein YibF or b3592 SW:YIBF_ECOLI (P32105) (202 aa) fasta scores: E(): 1.5e-26, 40.88% id in 203 aa, and to Escherichia coli O157:H7 EDL933 putative S-transferase YibF TR:AAG58736 (EMBL:AE005586) (202 aa) fasta scores: E(): 1.5e-26, 40.88% id in 203 aa.
  
    0.420
Your Current Organism:
Bordetella pertussis
NCBI taxonomy Id: 257313
Other names: B. pertussis Tohama I, Bordetella pertussis Tohama I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.