Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56059.1 | APT56348.1 | RGI145_01930 | RGI145_03735 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
| APT56059.1 | APT57660.1 | RGI145_01930 | RGI145_11650 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.657 |
| APT56059.1 | APT57824.1 | RGI145_01930 | RGI145_12575 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Cobaltochelatase subunit CobT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
| APT56059.1 | APT58964.1 | RGI145_01930 | RGI145_00400 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
| APT56059.1 | APT59140.1 | RGI145_01930 | RGI145_05990 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.548 |
| APT56102.1 | APT58355.1 | RGI145_02225 | RGI145_15795 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | 0.972 |
| APT56102.1 | APT58835.1 | RGI145_02225 | RGI145_18690 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | 0.969 |
| APT56102.1 | APT58964.1 | RGI145_02225 | RGI145_00400 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
| APT56348.1 | APT56059.1 | RGI145_03735 | RGI145_01930 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.807 |
| APT56348.1 | APT57660.1 | RGI145_03735 | RGI145_11650 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
| APT56348.1 | APT57824.1 | RGI145_03735 | RGI145_12575 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobaltochelatase subunit CobT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.657 |
| APT56348.1 | APT58964.1 | RGI145_03735 | RGI145_00400 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.636 |
| APT56348.1 | APT59140.1 | RGI145_03735 | RGI145_05990 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.640 |
| APT57660.1 | APT56059.1 | RGI145_11650 | RGI145_01930 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.657 |
| APT57660.1 | APT56348.1 | RGI145_11650 | RGI145_03735 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
| APT57660.1 | APT58964.1 | RGI145_11650 | RGI145_00400 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
| APT57824.1 | APT56059.1 | RGI145_12575 | RGI145_01930 | Cobaltochelatase subunit CobT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.590 |
| APT57824.1 | APT56348.1 | RGI145_12575 | RGI145_03735 | Cobaltochelatase subunit CobT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.657 |
| APT57824.1 | APT58964.1 | RGI145_12575 | RGI145_00400 | Cobaltochelatase subunit CobT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.569 |
| APT58355.1 | APT56102.1 | RGI145_15795 | RGI145_02225 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | 0.972 |
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