Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56304.1 | APT56305.1 | RGI145_03435 | RGI145_03440 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.485 |
| APT56304.1 | APT57076.1 | RGI145_03435 | RGI145_08185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
| APT56304.1 | APT58398.1 | RGI145_03435 | RGI145_16065 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.438 |
| APT56304.1 | APT59056.1 | RGI145_03435 | RGI145_03430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug export protein EmrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| APT56304.1 | map | RGI145_03435 | RGI145_03445 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.498 |
| APT56305.1 | APT56304.1 | RGI145_03440 | RGI145_03435 | Hypothetical protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
| APT56305.1 | map | RGI145_03440 | RGI145_03445 | Hypothetical protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.768 |
| APT57076.1 | APT56304.1 | RGI145_08185 | RGI145_03435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
| APT58398.1 | APT56304.1 | RGI145_16065 | RGI145_03435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| APT59056.1 | APT56304.1 | RGI145_03430 | RGI145_03435 | Multidrug export protein EmrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| map | APT56304.1 | RGI145_03445 | RGI145_03435 | Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |
| map | APT56305.1 | RGI145_03445 | RGI145_03440 | Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Hypothetical protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.768 |