Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56532.1 | APT56533.1 | RGI145_04850 | RGI145_04855 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APT56532.1 | APT57579.1 | RGI145_04850 | RGI145_11170 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.893 |
| APT56532.1 | APT57981.1 | RGI145_04850 | RGI145_13500 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| APT56532.1 | APT58982.1 | RGI145_04850 | RGI145_00930 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.930 |
| APT56532.1 | APT59107.1 | RGI145_04850 | RGI145_04845 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| APT56532.1 | APT59896.1 | RGI145_04850 | RGI145_21590 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| APT56532.1 | RGI145_15425 | RGI145_04850 | RGI145_15425 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.981 |
| APT56532.1 | potA | RGI145_04850 | RGI145_04835 | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.836 |
| APT56533.1 | APT56532.1 | RGI145_04855 | RGI145_04850 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APT56533.1 | APT59107.1 | RGI145_04855 | RGI145_04845 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| APT56533.1 | APT59394.1 | RGI145_04855 | RGI145_15430 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| APT56533.1 | APT59897.1 | RGI145_04855 | RGI145_21595 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| APT56533.1 | potA | RGI145_04855 | RGI145_04835 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.835 |
| APT57579.1 | APT56532.1 | RGI145_11170 | RGI145_04850 | Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.893 |
| APT57579.1 | APT59107.1 | RGI145_11170 | RGI145_04845 | Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
| APT57579.1 | APT59394.1 | RGI145_11170 | RGI145_15430 | Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.941 |
| APT57579.1 | APT59897.1 | RGI145_11170 | RGI145_21595 | Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.940 |
| APT57579.1 | potA | RGI145_11170 | RGI145_04835 | Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.786 |
| APT57981.1 | APT56532.1 | RGI145_13500 | RGI145_04850 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| APT57981.1 | APT59107.1 | RGI145_13500 | RGI145_04845 | Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
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