Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56451.1 | APT56452.1 | RGI145_04370 | RGI145_04375 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.993 |
| APT56451.1 | APT56454.1 | RGI145_04370 | RGI145_04385 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| APT56451.1 | APT56455.1 | RGI145_04370 | RGI145_04390 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.989 |
| APT56451.1 | APT56762.1 | RGI145_04370 | RGI145_06230 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Chemotaxis protein chel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| APT56451.1 | APT57888.1 | RGI145_04370 | RGI145_12955 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal-body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.962 |
| APT56451.1 | APT57889.1 | RGI145_04370 | RGI145_12960 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.994 |
| APT56451.1 | APT58199.1 | RGI145_04370 | RGI145_14870 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.997 |
| APT56451.1 | APT58200.1 | RGI145_04370 | RGI145_14875 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthesis protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.997 |
| APT56451.1 | flgH | RGI145_04370 | RGI145_12970 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.995 |
| APT56451.1 | flgI | RGI145_04370 | RGI145_06235 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.989 |
| APT56452.1 | APT56451.1 | RGI145_04375 | RGI145_04370 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.993 |
| APT56452.1 | APT56454.1 | RGI145_04375 | RGI145_04385 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| APT56452.1 | APT56455.1 | RGI145_04375 | RGI145_04390 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.982 |
| APT56452.1 | APT56762.1 | RGI145_04375 | RGI145_06230 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Chemotaxis protein chel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| APT56452.1 | APT57888.1 | RGI145_04375 | RGI145_12955 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal-body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.982 |
| APT56452.1 | APT57889.1 | RGI145_04375 | RGI145_12960 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.994 |
| APT56452.1 | APT58199.1 | RGI145_04375 | RGI145_14870 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.995 |
| APT56452.1 | APT58200.1 | RGI145_04375 | RGI145_14875 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar biosynthesis protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.998 |
| APT56452.1 | flgH | RGI145_04375 | RGI145_12970 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.995 |
| APT56452.1 | flgI | RGI145_04375 | RGI145_06235 | Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.995 |
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