Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56059.1 | APT56348.1 | RGI145_01930 | RGI145_03735 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
| APT56059.1 | APT56793.1 | RGI145_01930 | RGI145_06425 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family. | 0.683 |
| APT56059.1 | APT57173.1 | RGI145_01930 | RGI145_08760 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Cell envelope protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
| APT56059.1 | APT57660.1 | RGI145_01930 | RGI145_11650 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.657 |
| APT56059.1 | APT57867.1 | RGI145_01930 | RGI145_12840 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
| APT56059.1 | APT58782.1 | RGI145_01930 | RGI145_18375 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.725 |
| APT56059.1 | bamA | RGI145_01930 | RGI145_10280 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.663 |
| APT56059.1 | bamD | RGI145_01930 | RGI145_13375 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.494 |
| APT56059.1 | lptD | RGI145_01930 | RGI145_03825 | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.744 |
| APT56348.1 | APT56059.1 | RGI145_03735 | RGI145_01930 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.807 |
| APT56348.1 | APT56793.1 | RGI145_03735 | RGI145_06425 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family. | 0.760 |
| APT56348.1 | APT57171.1 | RGI145_03735 | RGI145_08750 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.609 |
| APT56348.1 | APT57173.1 | RGI145_03735 | RGI145_08760 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.740 |
| APT56348.1 | APT57660.1 | RGI145_03735 | RGI145_11650 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
| APT56348.1 | APT57867.1 | RGI145_03735 | RGI145_12840 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| APT56348.1 | APT58782.1 | RGI145_03735 | RGI145_18375 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.650 |
| APT56348.1 | bamA | RGI145_03735 | RGI145_10280 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.404 |
| APT56348.1 | lptD | RGI145_03735 | RGI145_03825 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.715 |
| APT56793.1 | APT56059.1 | RGI145_06425 | RGI145_01930 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family. | Lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.683 |
| APT56793.1 | APT56348.1 | RGI145_06425 | RGI145_03735 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
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