Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56039.1 | APT57202.1 | RGI145_01825 | RGI145_08930 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.754 |
| APT56039.1 | acpP | RGI145_01825 | RGI145_11280 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.567 |
| APT57201.1 | APT57202.1 | RGI145_08925 | RGI145_08930 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.785 |
| APT57201.1 | APT57203.1 | RGI145_08925 | RGI145_08940 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.624 |
| APT57201.1 | APT59223.1 | RGI145_08925 | RGI145_08935 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | 0.674 |
| APT57201.1 | dapA | RGI145_08925 | RGI145_08920 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.595 |
| APT57202.1 | APT56039.1 | RGI145_08930 | RGI145_01825 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.754 |
| APT57202.1 | APT57201.1 | RGI145_08930 | RGI145_08925 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.785 |
| APT57202.1 | APT57203.1 | RGI145_08930 | RGI145_08940 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.562 |
| APT57202.1 | APT59223.1 | RGI145_08930 | RGI145_08935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | 0.562 |
| APT57202.1 | acpP | RGI145_08930 | RGI145_11280 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.424 |
| APT57202.1 | dapA | RGI145_08930 | RGI145_08920 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.439 |
| APT57203.1 | APT57201.1 | RGI145_08940 | RGI145_08925 | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.624 |
| APT57203.1 | APT57202.1 | RGI145_08940 | RGI145_08930 | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| APT57203.1 | APT59223.1 | RGI145_08940 | RGI145_08935 | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | 0.836 |
| APT59223.1 | APT57201.1 | RGI145_08935 | RGI145_08925 | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.674 |
| APT59223.1 | APT57202.1 | RGI145_08935 | RGI145_08930 | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| APT59223.1 | APT57203.1 | RGI145_08935 | RGI145_08940 | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.836 |
| acpP | APT56039.1 | RGI145_11280 | RGI145_01825 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.567 |
| acpP | APT57202.1 | RGI145_11280 | RGI145_08930 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
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