Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT56212.1 | APT58053.1 | RGI145_02885 | RGI145_13940 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| APT56212.1 | APT58057.1 | RGI145_02885 | RGI145_13960 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
| APT56212.1 | APT60073.1 | RGI145_02885 | RGI145_20725 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |
| APT56212.1 | ssuB | RGI145_02885 | RGI145_13955 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.967 |
| APT56212.1 | ssuD | RGI145_02885 | RGI145_18440 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.924 |
| APT58052.1 | APT58053.1 | RGI145_13935 | RGI145_13940 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.978 |
| APT58052.1 | APT58055.1 | RGI145_13935 | RGI145_13950 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aliphatic sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| APT58052.1 | APT58057.1 | RGI145_13935 | RGI145_13960 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| APT58052.1 | APT60073.1 | RGI145_13935 | RGI145_20725 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
| APT58052.1 | ssuB | RGI145_13935 | RGI145_13955 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.995 |
| APT58052.1 | ssuD | RGI145_13935 | RGI145_18440 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.924 |
| APT58053.1 | APT56212.1 | RGI145_13940 | RGI145_02885 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| APT58053.1 | APT58052.1 | RGI145_13940 | RGI145_13935 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.978 |
| APT58053.1 | APT58055.1 | RGI145_13940 | RGI145_13950 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aliphatic sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.973 |
| APT58053.1 | APT58057.1 | RGI145_13940 | RGI145_13960 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
| APT58053.1 | APT58793.1 | RGI145_13940 | RGI145_18435 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.895 |
| APT58053.1 | APT59675.1 | RGI145_13940 | RGI145_20320 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
| APT58053.1 | APT59700.1 | RGI145_13940 | RGI145_20455 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
| APT58053.1 | ssuB | RGI145_13940 | RGI145_13955 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.961 |
| APT58053.1 | ssuD | RGI145_13940 | RGI145_18440 | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.921 |
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