APT58187.1 protein (Roseomonas gilardii) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

APT58187.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)

Predicted Functional Partners:

APT57535.1

0.826

APT59402.1

0.826

APT55844.1

0.816

APT59868.1

0.809

APT58499.1

0.808

APT57483.1

0.767

APT59376.1

0.752

APT58332.1

0.718

APT57534.1

0.556

Your Current Organism:

Roseomonas gilardii

NCBI taxonomy Id: 257708
Other names: ATCC 49956, CCUG 33005, CIP 104026, R. gilardii, strain 5424

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APT55844.1	APT57483.1	RGI145_00600	RGI145_10630	Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.507
APT55844.1	APT58187.1	RGI145_00600	RGI145_14790	Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.816
APT57483.1	APT55844.1	RGI145_10630	RGI145_00600	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
APT57483.1	APT57535.1	RGI145_10630	RGI145_10920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
APT57483.1	APT58187.1	RGI145_10630	RGI145_14790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
APT57483.1	APT58332.1	RGI145_10630	RGI145_15650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.451
APT57483.1	APT59402.1	RGI145_10630	RGI145_15655	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.583
APT57534.1	APT57535.1	RGI145_10915	RGI145_10920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
APT57534.1	APT58187.1	RGI145_10915	RGI145_14790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
APT57534.1	APT58332.1	RGI145_10915	RGI145_15650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.494
APT57535.1	APT57483.1	RGI145_10920	RGI145_10630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.502
APT57535.1	APT57534.1	RGI145_10920	RGI145_10915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
APT57535.1	APT58187.1	RGI145_10920	RGI145_14790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
APT58187.1	APT55844.1	RGI145_14790	RGI145_00600	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.816
APT58187.1	APT57483.1	RGI145_14790	RGI145_10630	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.767
APT58187.1	APT57534.1	RGI145_14790	RGI145_10915	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
APT58187.1	APT57535.1	RGI145_14790	RGI145_10920	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
APT58187.1	APT58332.1	RGI145_14790	RGI145_15650	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
APT58187.1	APT58499.1	RGI145_14790	RGI145_16665	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
APT58187.1	APT59376.1	RGI145_14790	RGI145_14795	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752