APT58601.1 protein (Roseomonas gilardii) - STRING interaction network

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

APT58601.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)

Predicted Functional Partners:

APT58604.1

0.946

APT58603.1

0.942

APT58600.1

0.853

APT58602.1

0.839

oppD

0.836

APT58599.1

0.821

APT58104.1

0.704

APT56078.1

0.673

APT56068.1

0.541

APT58880.1

0.534

Your Current Organism:

Roseomonas gilardii

NCBI taxonomy Id: 257708
Other names: ATCC 49956, CCUG 33005, CIP 104026, R. gilardii, strain 5424

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APT56068.1	APT56078.1	RGI145_01990	RGI145_02050	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
APT56068.1	APT58104.1	RGI145_01990	RGI145_14280	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APT56068.1	APT58600.1	RGI145_01990	RGI145_17255	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
APT56068.1	APT58601.1	RGI145_01990	RGI145_17260	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
APT56068.1	APT58603.1	RGI145_01990	RGI145_17275	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
APT56068.1	APT58604.1	RGI145_01990	RGI145_17280	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
APT56068.1	APT58880.1	RGI145_01990	RGI145_18970	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
APT56078.1	APT56068.1	RGI145_02050	RGI145_01990	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
APT56078.1	APT58104.1	RGI145_02050	RGI145_14280	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
APT56078.1	APT58600.1	RGI145_02050	RGI145_17255	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
APT56078.1	APT58601.1	RGI145_02050	RGI145_17260	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
APT56078.1	APT58880.1	RGI145_02050	RGI145_18970	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
APT58104.1	APT56068.1	RGI145_14280	RGI145_01990	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APT58104.1	APT56078.1	RGI145_14280	RGI145_02050	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
APT58104.1	APT58600.1	RGI145_14280	RGI145_17255	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.701
APT58104.1	APT58601.1	RGI145_14280	RGI145_17260	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
APT58104.1	APT58880.1	RGI145_14280	RGI145_18970	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
APT58599.1	APT58600.1	RGI145_17250	RGI145_17255	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
APT58599.1	APT58601.1	RGI145_17250	RGI145_17260	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
APT58599.1	APT58602.1	RGI145_17250	RGI145_17270	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.773