APT58642.1 protein (Roseomonas gilardii) - STRING interaction network

Nodes:

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

APT58642.1

ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)

Predicted Functional Partners:

APT59718.1

0.967

APT59454.1

0.961

APT58641.1

0.961

APT59679.1

0.956

APT59453.1

0.954

APT55765.1

0.925

APT56708.1

0.912

APT56581.1

0.896

APT58640.1

0.874

APT59976.1

0.855

Your Current Organism:

Roseomonas gilardii

NCBI taxonomy Id: 257708
Other names: ATCC 49956, CCUG 33005, CIP 104026, R. gilardii, strain 5424

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APT55765.1	APT56581.1	RGI145_00115	RGI145_05140	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APT55765.1	APT56708.1	RGI145_00115	RGI145_05900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491
APT55765.1	APT58640.1	RGI145_00115	RGI145_17495	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
APT55765.1	APT58641.1	RGI145_00115	RGI145_17505	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
APT55765.1	APT58642.1	RGI145_00115	RGI145_17510	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
APT55765.1	APT59453.1	RGI145_00115	RGI145_17465	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
APT55765.1	APT59454.1	RGI145_00115	RGI145_17500	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
APT55765.1	APT59679.1	RGI145_00115	RGI145_20345	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
APT55765.1	APT59718.1	RGI145_00115	RGI145_20550	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.465
APT55765.1	APT59976.1	RGI145_00115	RGI145_22045	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
APT56581.1	APT55765.1	RGI145_05140	RGI145_00115	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APT56581.1	APT56708.1	RGI145_05140	RGI145_05900	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APT56581.1	APT58640.1	RGI145_05140	RGI145_17495	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
APT56581.1	APT58641.1	RGI145_05140	RGI145_17505	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
APT56581.1	APT58642.1	RGI145_05140	RGI145_17510	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
APT56581.1	APT59453.1	RGI145_05140	RGI145_17465	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
APT56581.1	APT59454.1	RGI145_05140	RGI145_17500	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
APT56581.1	APT59679.1	RGI145_05140	RGI145_20345	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
APT56581.1	APT59718.1	RGI145_05140	RGI145_20550	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
APT56581.1	APT59976.1	RGI145_05140	RGI145_22045	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573