STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001074155_00788Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_001074155_00787
Unannotated protein.
 
   
 0.846
GCA_001074155_00785
Unannotated protein.
       0.823
GCA_001074155_00786
Unannotated protein.
       0.823
GCA_001074155_01512
Unannotated protein.
 
  
 0.537
B0177_06650
Unannotated protein.
 
   
 0.535
GCA_001074155_01505
Unannotated protein.
 
   
 0.504
glmS
Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.494
GCA_001074155_01503
Unannotated protein.
 
     0.467
GCA_001074155_01502
Unannotated protein.
  
     0.464
GCA_001074155_01506
Unannotated protein.
  
     0.452
Your Current Organism:
Streptococcus pseudopneumoniae
NCBI taxonomy Id: 257758
Other names: ATCC BAA-960, ATCC:BAA:960, CCUG 49455, CIP 108659, DSM 18670, NCTC 13806, S. pseudopneumoniae, Streptococcus pseudopneumoniae Arbique et al. 2005, strain 0108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.