STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0177_02105Unannotated protein. (158 aa)    
Predicted Functional Partners:
B0177_02100
Unannotated protein.
 
 
 0.995
B0177_02095
Unannotated protein.
 
  
 0.950
B0177_10790
Unannotated protein.
  
  
 0.782
B0177_07870
Unannotated protein.
 
  
 0.729
lacC
Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.661
B0177_06170
Unannotated protein.
  
  
 0.636
B0177_05905
Unannotated protein.
  
  
 0.636
B0177_07265
Unannotated protein.
  
  
 0.578
lacB
Unannotated protein.
 
   
 0.574
GCA_001074155_00925
Unannotated protein.
     
 0.562
Your Current Organism:
Streptococcus pseudopneumoniae
NCBI taxonomy Id: 257758
Other names: ATCC BAA-960, ATCC:BAA:960, CCUG 49455, CIP 108659, DSM 18670, NCTC 13806, S. pseudopneumoniae, Streptococcus pseudopneumoniae Arbique et al. 2005, strain 0108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.