STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fniUnannotated protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (333 aa)    
Predicted Functional Partners:
mvk
Unannotated protein.
 
  
 0.965
B0177_10405
Unannotated protein.
 
   
 0.962
GCA_001074155_01271
Unannotated protein.
 
  
 0.961
B0177_05875
Unannotated protein.
 
  
 0.844
B0177_05880
Unannotated protein; Belongs to the HMG-CoA reductase family.
   
 0.839
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.711
GCA_001074155_01268
Unannotated protein.
       0.610
B0177_10390
Unannotated protein.
       0.610
B0177_10380
Unannotated protein.
  
    0.580
ilvB
Unannotated protein.
  
 
 0.559
Your Current Organism:
Streptococcus pseudopneumoniae
NCBI taxonomy Id: 257758
Other names: ATCC BAA-960, ATCC:BAA:960, CCUG 49455, CIP 108659, DSM 18670, NCTC 13806, S. pseudopneumoniae, Streptococcus pseudopneumoniae Arbique et al. 2005, strain 0108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.