STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717275_00096Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_000717275_04228
Unannotated protein.
  
   
 0.721
GCA_000717275_04886
Unannotated protein.
  
    0.691
GCA_000717275_00682
Unannotated protein.
  
    0.645
GCA_000717275_00097
Unannotated protein.
 
     0.593
GCA_000717275_00277
Unannotated protein.
  
     0.570
GCA_000717275_03766
Unannotated protein.
 
 
 0.561
GCA_000717275_00098
Unannotated protein.
       0.518
GCA_000717275_00099
Unannotated protein.
       0.518
GCA_000717275_00276
Unannotated protein.
 
  
 0.497
GCA_000717275_01536
Unannotated protein.
  
     0.425
Your Current Organism:
Kitasatospora arboriphila
NCBI taxonomy Id: 258052
Other names: DSM 44785, HKI 0189, JCM 13002, K. arboriphila, Kitasatospora arboriphila Groth et al. 2004, Kitasatospora arborophila, NBRC 101834, NCIMB 13973, strain 2291-120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.