STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717275_00422Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000717275_00424
Unannotated protein.
 
     0.922
GCA_000717275_00423
Unannotated protein.
 
    0.917
GCA_000717275_01224
Unannotated protein.
 
      0.875
GCA_000717275_00425
Unannotated protein.
 
     0.786
GCA_000717275_00426
Unannotated protein.
    
  0.706
GCA_000717275_00427
Unannotated protein.
       0.697
GCA_000717275_01986
Unannotated protein.
  
     0.697
GCA_000717275_00270
Unannotated protein.
    
 0.669
GCA_000717275_01221
Unannotated protein.
 
  
  0.666
GCA_000717275_04139
Unannotated protein.
    
  0.657
Your Current Organism:
Kitasatospora arboriphila
NCBI taxonomy Id: 258052
Other names: DSM 44785, HKI 0189, JCM 13002, K. arboriphila, Kitasatospora arboriphila Groth et al. 2004, Kitasatospora arborophila, NBRC 101834, NCIMB 13973, strain 2291-120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.