STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717275_01420Unannotated protein. (338 aa)    
Predicted Functional Partners:
GCA_000717275_01419
Unannotated protein.
 
    0.858
GCA_000717275_01296
Unannotated protein.
  
     0.709
GCA_000717275_00056
Unannotated protein.
 
   0.606
GCA_000717275_03350
Unannotated protein.
 
   0.497
GCA_000717275_03341
Unannotated protein.
  
 
  0.479
GCA_000717275_00459
Unannotated protein.
   
 
 0.474
GCA_000717275_00473
Unannotated protein.
   
 
 0.474
GCA_000717275_04850
Unannotated protein.
   
 
 0.468
GCA_000717275_04292
Unannotated protein.
 
   0.432
Your Current Organism:
Kitasatospora arboriphila
NCBI taxonomy Id: 258052
Other names: DSM 44785, HKI 0189, JCM 13002, K. arboriphila, Kitasatospora arboriphila Groth et al. 2004, Kitasatospora arborophila, NBRC 101834, NCIMB 13973, strain 2291-120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.