STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717275_03693Unannotated protein. (226 aa)    
Predicted Functional Partners:
GCA_000717275_01243
Unannotated protein.
   
 
 0.859
GCA_000717275_02081
Unannotated protein.
   
 0.787
GCA_000717275_02736
Unannotated protein.
   
 0.787
GCA_000717275_01981
Unannotated protein.
  
 0.723
GCA_000717275_03694
Unannotated protein.
       0.716
GCA_000717275_04991
Unannotated protein.
   
 
 0.674
GCA_000717275_03695
Unannotated protein.
  
    0.622
GCA_000717275_04049
Unannotated protein.
     
 0.541
GCA_000717275_04080
Unannotated protein.
  
  
 0.527
GCA_000717275_03498
Unannotated protein.
      0.511
Your Current Organism:
Kitasatospora arboriphila
NCBI taxonomy Id: 258052
Other names: DSM 44785, HKI 0189, JCM 13002, K. arboriphila, Kitasatospora arboriphila Groth et al. 2004, Kitasatospora arborophila, NBRC 101834, NCIMB 13973, strain 2291-120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.