STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM67458.1Putative ABC transport system ATP-binding protein. (224 aa)    
Predicted Functional Partners:
SDM67528.1
Putative ABC transport system permease protein.
 0.999
SDM55675.1
Putative ABC transport system permease protein.
  
 0.997
SDM73148.1
Putative ABC transport system permease protein.
 0.997
SDN43763.1
Putative ABC transport system permease protein.
 0.996
SDM72743.1
MacB-like core domain-containing protein.
 0.962
SDM67563.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.921
SDN50306.1
Peptide/nickel transport system permease protein.
 
 
    0.889
SDM73098.1
HlyD family secretion protein.
 
 
 0.863
SDN43804.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.799
SDM79307.1
Putative ABC transport system permease protein.
 
 0.735
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.