Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM55675.1 | SDM72021.1 | SAMN05192585_10198 | SAMN05192585_10418 | Putative ABC transport system permease protein. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.644 |
SDM55675.1 | SDM73449.1 | SAMN05192585_10198 | SAMN05192585_10450 | Putative ABC transport system permease protein. | Serine/threonine protein kinase. | 0.737 |
SDM55675.1 | SDM77860.1 | SAMN05192585_10198 | SAMN05192585_1058 | Putative ABC transport system permease protein. | Serine/threonine protein kinase. | 0.422 |
SDM55675.1 | SDN13424.1 | SAMN05192585_10198 | SAMN05192585_1123 | Putative ABC transport system permease protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.435 |
SDM55675.1 | SDN93847.1 | SAMN05192585_10198 | SAMN05192585_14017 | Putative ABC transport system permease protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.913 |
SDM55675.1 | pheT | SAMN05192585_10198 | SAMN05192585_14812 | Putative ABC transport system permease protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.470 |
SDM72021.1 | SDM55675.1 | SAMN05192585_10418 | SAMN05192585_10198 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Putative ABC transport system permease protein. | 0.644 |
SDM72021.1 | SDM73449.1 | SAMN05192585_10418 | SAMN05192585_10450 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Serine/threonine protein kinase. | 0.764 |
SDM72021.1 | SDM73489.1 | SAMN05192585_10418 | SAMN05192585_10451 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Protein phosphatase. | 0.892 |
SDM72021.1 | SDM77860.1 | SAMN05192585_10418 | SAMN05192585_1058 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Serine/threonine protein kinase. | 0.401 |
SDM72021.1 | SDM90830.1 | SAMN05192585_10418 | SAMN05192585_10767 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | DivIVA domain-containing protein. | 0.656 |
SDM72021.1 | pheT | SAMN05192585_10418 | SAMN05192585_14812 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.567 |
SDM72021.1 | rsgA | SAMN05192585_10418 | SAMN05192585_10449 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.594 |
SDM73366.1 | SDM73449.1 | SAMN05192585_10448 | SAMN05192585_10450 | Thiamine pyrophosphokinase. | Serine/threonine protein kinase. | 0.800 |
SDM73366.1 | SDM73489.1 | SAMN05192585_10448 | SAMN05192585_10451 | Thiamine pyrophosphokinase. | Protein phosphatase. | 0.723 |
SDM73366.1 | rsgA | SAMN05192585_10448 | SAMN05192585_10449 | Thiamine pyrophosphokinase. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.976 |
SDM73449.1 | SDM55675.1 | SAMN05192585_10450 | SAMN05192585_10198 | Serine/threonine protein kinase. | Putative ABC transport system permease protein. | 0.737 |
SDM73449.1 | SDM72021.1 | SAMN05192585_10450 | SAMN05192585_10418 | Serine/threonine protein kinase. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.764 |
SDM73449.1 | SDM73366.1 | SAMN05192585_10450 | SAMN05192585_10448 | Serine/threonine protein kinase. | Thiamine pyrophosphokinase. | 0.800 |
SDM73449.1 | SDM73489.1 | SAMN05192585_10450 | SAMN05192585_10451 | Serine/threonine protein kinase. | Protein phosphatase. | 0.999 |
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