STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM79499.1Glycosyltransferase, GT2 family. (407 aa)    
Predicted Functional Partners:
SDN19939.1
Flagellar motor switch protein FliN/FliY.
    
   0.919
SDN16032.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 0.604
SDM52793.1
Tetratricopeptide repeat-containing protein.
  
 0.585
SDM84763.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.575
SDN01367.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.575
SDN16065.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.572
SDN15859.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.563
SDM84488.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.538
SDN01328.1
O-antigen biosynthesis protein WbqP.
  
 
 0.538
SDN28485.1
Nucleoside-diphosphate-sugar epimerase.
 
 
 0.525
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.