STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM83361.1Putative amidase domain-containing protein. (165 aa)    
Predicted Functional Partners:
SDO11177.1
Hypothetical protein.
  
     0.577
SDM83335.1
Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family.
       0.513
SDN75494.1
Hypothetical protein.
  
     0.495
SDN75538.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.473
SDN27508.1
Sporulation integral membrane protein YlbJ.
  
     0.465
SDM53252.1
Spore germination protein KB.
  
     0.427
SDN89731.1
Protein-glutamine gamma-glutamyltransferase.
  
     0.400
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.