STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM88437.1Indolepyruvate ferredoxin oxidoreductase beta subunit. (196 aa)    
Predicted Functional Partners:
SDN25785.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SDM88482.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 0.989
SDN76179.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.968
SDN76227.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.942
SDN13424.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.910
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.896
SDM88354.1
Uncharacterized conserved protein, contains tandem ACT domains.
 
    0.845
SDM62426.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.839
SDN93190.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.835
SDM88398.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    0.781
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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