Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDM93464.1 | SDM93505.1 | SAMN05192585_1087 | SAMN05192585_1088 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.823 |
| SDM93464.1 | SDM95879.1 | SAMN05192585_1087 | SAMN05192585_10870 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.606 |
| SDM93464.1 | SDN10223.1 | SAMN05192585_1087 | SAMN05192585_11150 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized conserved protein YegL, contains vWA domain of TerY type. | 0.504 |
| SDM93464.1 | SDN19251.1 | SAMN05192585_1087 | SAMN05192585_11325 | RNA polymerase sigma-70 factor, ECF subfamily. | Chemotaxis protein methyltransferase CheR. | 0.550 |
| SDM93464.1 | SDN33978.1 | SAMN05192585_1087 | SAMN05192585_11657 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.537 |
| SDM93464.1 | SDO09969.1 | SAMN05192585_1087 | SAMN05192585_1553 | RNA polymerase sigma-70 factor, ECF subfamily. | PadR family transcriptional regulator, regulatory protein PadR. | 0.462 |
| SDM93464.1 | rpoA | SAMN05192585_1087 | SAMN05192585_108101 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.537 |
| SDM93464.1 | rpoB | SAMN05192585_1087 | SAMN05192585_10146 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.610 |
| SDM93464.1 | rpoC | SAMN05192585_1087 | SAMN05192585_10145 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.675 |
| SDM93464.1 | rpoZ | SAMN05192585_1087 | SAMN05192585_10457 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.537 |
| SDM93505.1 | SDM93464.1 | SAMN05192585_1088 | SAMN05192585_1087 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.823 |
| SDM95879.1 | SDM93464.1 | SAMN05192585_10870 | SAMN05192585_1087 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.606 |
| SDN10223.1 | SDM93464.1 | SAMN05192585_11150 | SAMN05192585_1087 | Uncharacterized conserved protein YegL, contains vWA domain of TerY type. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.504 |
| SDN19251.1 | SDM93464.1 | SAMN05192585_11325 | SAMN05192585_1087 | Chemotaxis protein methyltransferase CheR. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.550 |
| SDN33978.1 | SDM93464.1 | SAMN05192585_11657 | SAMN05192585_1087 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.537 |
| SDO09969.1 | SDM93464.1 | SAMN05192585_1553 | SAMN05192585_1087 | PadR family transcriptional regulator, regulatory protein PadR. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.462 |
| rpoA | SDM93464.1 | SAMN05192585_108101 | SAMN05192585_1087 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.537 |
| rpoA | rpoB | SAMN05192585_108101 | SAMN05192585_10146 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoC | SAMN05192585_108101 | SAMN05192585_10145 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoZ | SAMN05192585_108101 | SAMN05192585_10457 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
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