STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN01806.1Putative glycosyl hydrolase domain-containing protein. (406 aa)    
Predicted Functional Partners:
SDN01851.1
Na+-transporting oxaloacetate decarboxylase beta subunit.
       0.773
SDN01773.1
Electron transport complex protein RnfA; Belongs to the NqrDE/RnfAE family.
       0.531
SDN35980.1
Stage III sporulation protein AE.
  
     0.483
SDN29693.1
Spore cortex biosynthesis protein YabQ.
  
     0.465
SDO16339.1
Uncharacterized membrane protein YdbT, contains bPH2 (pleckstrin homology) domain.
  
     0.461
SDN01733.1
Electron transport complex protein RnfE; Belongs to the NqrDE/RnfAE family.
       0.451
SDM65912.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.407
SDN30123.1
Hypothetical protein.
  
     0.405
SDN01662.1
Electron transport complex protein RnfC.
 
     0.400
SDN64547.1
Calcineurin-like phosphoesterase.
  
     0.400
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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