STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN05196.1Protein of unknown function. (78 aa)    
Predicted Functional Partners:
SDN05156.1
Hypothetical protein.
 
     0.941
SDN05237.1
Protein of unknown function.
 
    0.881
SDN09343.1
Hypothetical protein.
 
     0.738
SDN78231.1
Hypothetical protein.
 
     0.731
SDN05064.1
Phage terminase, small subunit.
 
    0.664
SDN06189.1
Hypothetical protein.
 
    0.627
SDN08589.1
Hypothetical protein.
  
    0.597
SDN05115.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
    0.548
SDN04533.1
Hypothetical protein.
 
     0.480
SDN05319.1
Hypothetical protein.
       0.475
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.