STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN09165.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
SDN09201.1
Phage major capsid protein, HK97 family.
       0.766
SDN08990.1
Hypothetical protein.
       0.738
SDN09031.1
Phage major tail protein, phi13 family.
       0.738
SDN09055.1
Hypothetical protein.
       0.738
SDN09085.1
Phage protein, HK97 gp10 family.
       0.738
SDN09113.1
Phage head-tail joining protein.
       0.738
SDN09139.1
Phage gp6-like head-tail connector protein.
       0.738
SDN09254.1
Phage portal protein, HK97 family.
       0.715
SDN09228.1
ATP-dependent Clp protease proteolytic subunit ClpP; Belongs to the peptidase S14 family.
       0.713
SDN09288.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
       0.683
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.